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GSTR-9 vs GSTR-9C Annual Return Reconciliation Guide (2026)

July 24, 202611 min readAkib Husain

Quick Summary: What Is the Difference Between Form GSTR-9 and GSTR-9C?

GSTR-9 is the consolidated Annual Return summarizing monthly GSTR-1 and GSTR-3B filings for taxpayers with turnover > ₹2 Cr. GSTR-9C is a self-certified Reconciliation Statement matching audited financial statements (P&L/Balance Sheet) with GSTR-9 for taxpayers with turnover > ₹5 Cr. Both are due by December 31st.

  • GSTR-9 Threshold: Mandatory for AATO > ₹2 Crores (Optional <= ₹2 Cr).
  • GSTR-9C Threshold: Mandatory for AATO > ₹5 Crores (Self-Certified by taxpayer).
  • Filing Sequence: GSTR-9 MUST be filed on portal before GSTR-9C opens.
  • Statutory Deadline: December 31st following the end of the financial year.

1. Comprehensive Comparison Matrix: GSTR-9 vs GSTR-9C

Taxpayers must understand the key legal and practical differences between GSTR-9 and GSTR-9C:

Comparison ParameterForm GSTR-9 (Annual Return)Form GSTR-9C (Reconciliation Statement)
Legal Form TypeConsolidated Annual Summary ReturnReconciliation Statement with Audited Books
Turnover Threshold (AATO)Mandatory > ₹2.00 CroresMandatory > ₹5.00 Crores
Certification AuthorityFiled directly by TaxpayerSelf-Certified by Taxpayer (No CA audit)
Filing Sequence & Due DateFiled FIRST by Dec 31stFiled SECOND (after GSTR-9) by Dec 31st

2. Using Tally Prime GST Annual Computation Report

Tally Prime provides a dedicated report for annual reconciliation:

  1. Go to Gateway of Tally > Display More Reports > GST Reports > GST Annual Computation.
  2. Press F2 and set the period for the full financial year (e.g. 1-Apr-2025 to 31-Mar-2026).
  3. Compare turnover and tax liability against monthly GSTR-1 and GSTR-3B filings.
  4. Press Alt+E (Export) to export Excel worksheets for GSTR-9C offline tool input.

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A
Akib HusainExpert Reviewer

Founder & Chief Architect of TrulyInvoice

Last Verified: July 24, 2026
TallyPrime FY 2026-27 (v4.0+)
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